Singularity

Singularity (opens new window) provides application containers for Linux that is also compatible with Docker.

Install with Conda

Requirements

• Conda (miniconda), see our Conda tutorial for more details.
• Conda channels: conda-forge, bioconda

Add the conda-forge channel

You will need the conda-forge channel to install Singularity. If you have not set channels yet make sure to add it:

conda config --add channels conda-forge

Install singularity in conda base

conda install -n base -c conda-forge "singularity>=3.0.0"